Homer de novo Motif Results (GS404_IP_BG4_93T_m1_F2L0_peaks_MotifOutput//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3867
Total background sequences = 43555
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G T A G C C A G T A C T G G T C A T A C G C G A T T A G C C G T A A G C T A G T C T C A G 1e-490-1.130e+0324.08%3.36%48.6bp (61.5bp)Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer(0.981)
More Information | Similar Motifs Found
motif file (matrix)
2 T C G A C T A G A G T C A T G C C G T A C T G A C G A T T A G C T C G A T C A G T G C A C T A G 1e-247-5.695e+0217.51%3.65%50.0bp (66.3bp)NFY(CCAAT)/Promoter/Homer(0.972)
More Information | Similar Motifs Found
motif file (matrix)
3 C T A G A T G C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A G C T A G T C 1e-172-3.971e+0224.98%9.45%53.1bp (66.1bp)Sp1(Zf)/Promoter/Homer(0.946)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C A G T C C G T A A T G C G A C T C T G A A C T G C T A G C A T G A C T G A C T G G T A C 1e-89-2.064e+025.35%0.89%48.3bp (63.6bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.931)
More Information | Similar Motifs Found
motif file (matrix)
5 A G T C A C G T T C A G T G A C C T A G G T A C G T C A A G C T A T C G G T A C A C T G G A T C 1e-83-1.932e+028.17%2.21%51.4bp (73.0bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.980)
More Information | Similar Motifs Found
motif file (matrix)
6 A T C G C G A T T C G A C T G A A G T C A G T C C G T A G T A C C G T A T C A G 1e-71-1.639e+0211.25%4.29%53.3bp (60.4bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.972)
More Information | Similar Motifs Found
motif file (matrix)
7 C G T A T C G A T A G C T G A C C T A G T A C G T G C A C T G A T A C G A G C T 1e-68-1.584e+0212.70%5.29%55.9bp (64.7bp)ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer(0.983)
More Information | Similar Motifs Found
motif file (matrix)
8 T G C A T A C G G A C T T A G C T C G A G A T C C T A G G A C T T C A G T A C G 1e-59-1.371e+029.49%3.62%52.4bp (65.3bp)USF1/MA0093.2/Jaspar(0.916)
More Information | Similar Motifs Found
motif file (matrix)
9 C T A G C T A G A C T G C G T A T C G A C G A T A G C T T A C G C A G T C T G A A C T G A C G T 1e-58-1.350e+023.26%0.50%52.3bp (60.5bp)GFY(?)/Promoter/Homer(0.994)
More Information | Similar Motifs Found
motif file (matrix)
10 T C G A C T A G T C G A A C T G G A T C A C G T C A T G G C A T 1e-39-9.054e+0147.40%36.99%56.6bp (64.2bp)MSC/MA0665.1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)
11 G A T C G A T C G T C A T C A G C G A T G T C A C G T A T C G A G T A C C T G A 1e-34-8.034e+0118.05%11.26%57.5bp (61.6bp)FOXI1/MA0042.2/Jaspar(0.886)
More Information | Similar Motifs Found
motif file (matrix)
12 A C T G C A G T A G C T C A T G A G T C G A T C C T G A C A G T C T A G T A C G 1e-34-7.956e+017.40%3.29%55.0bp (62.9bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.922)
More Information | Similar Motifs Found
motif file (matrix)
13 G A T C T A G C T C G A T A G C C T G A T A C G T A C G T C G A T G C A C G A T 1e-24-5.564e+0110.27%5.98%54.6bp (60.3bp)SPIB/MA0081.1/Jaspar(0.743)
More Information | Similar Motifs Found
motif file (matrix)
14 G A C T G T A C C G A T G T A C C T A G A G T C C T A G C G T A 1e-20-4.613e+017.71%4.34%54.0bp (72.1bp)ZBTB33/MA0527.1/Jaspar(0.875)
More Information | Similar Motifs Found
motif file (matrix)
15 A C G T A G T C A G T C A G T C C T G A A T C G C T G A C G T A 1e-20-4.607e+018.25%4.76%55.8bp (58.6bp)STAT3/MA0144.2/Jaspar(0.841)
More Information | Similar Motifs Found
motif file (matrix)
16 A T C G C G A T T A C G T C G A T A G C A T C G A G C T T A G C G T C A A C G T A T C G A T G C 1e-18-4.320e+011.29%0.26%48.5bp (51.5bp)JDP2(var.2)/MA0656.1/Jaspar(0.895)
More Information | Similar Motifs Found
motif file (matrix)
17 G C A T T A C G A C G T A T C G G T C A A G C T G C A T C G T A G C T A T A G C G T A C G T C A 1e-15-3.679e+011.32%0.32%53.8bp (58.7bp)PH0073.1_Hoxc9/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
18 A C T G G A T C G T A C C T A G A G T C A G T C C G T A A C G T T G A C A G C T A C G T A C T G 1e-15-3.655e+011.34%0.33%62.2bp (70.8bp)YY1(Zf)/Promoter/Homer(0.988)
More Information | Similar Motifs Found
motif file (matrix)
19 C T A G G A T C G C T A C T A G C T A G G T A C C G A T A C T G A G T C A T G C C T G A C T A G 1e-14-3.431e+010.78%0.11%57.8bp (52.1bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.808)
More Information | Similar Motifs Found
motif file (matrix)
20 T A C G G T C A A T C G T A G C A G C T T G C A A C T G A T G C 1e-13-3.161e+0110.47%7.13%57.0bp (67.6bp)POL010.1_DCE_S_III/Jaspar(0.634)
More Information | Similar Motifs Found
motif file (matrix)
21 * T C G A G A T C C A G T G C T A G A T C C A T G G T C A G A T C G T C A C G A T G C T A A C T G 1e-10-2.492e+016.90%4.51%55.0bp (67.4bp)Crem/MA0609.1/Jaspar(0.793)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T A C G T A G C T C A T G T A C G G A T C T C A G G T A C A C T G A C G T T C G A T C G A 1e-9-2.078e+010.18%0.01%49.5bp (36.3bp)E2F8/MA0865.1/Jaspar(0.772)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T A C A C T G A C T G A C T G A G T C A C T G C G T A G T A C A C G T A T G C C G T A C T G A 1e-7-1.697e+010.13%0.00%14.2bp (0.0bp)PB0143.1_Klf7_2/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C C G T A A G T C A C G T C T G A A G T C C G T A A G T C C G T A A G T C C T G A G T A C 1e-4-9.217e+000.13%0.01%41.6bp (54.3bp)PB0130.1_Gm397_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
25 * C G T A A C G T C T A G A C T G C G T A C G T A A C G T A C T G A C T G C G T A 1e-2-5.037e+000.34%0.15%54.3bp (58.3bp)PB0098.1_Zfp410_1/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)